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Hello Josh Yu,
We are using the same kit and SDK and we are not facing any such issues. Please let me know that following:
1) Any changes have you done in the SDK?
2) Is Avent provided you the platform files?
3) What application and conditions in which you are facing this issue?
4) Steps to reproduce the issue?
This will help us to narrow down and provide you the assistance.
This problem only happens in the debug build (when "-debug" is added to the make target). I'm also use the ST-Link V2 as my debugger instead of the FTDI debugger, so the definition of JTAG in wiced_toolchain_common.mk is pointing at "scripts/interface/stlink-v2". Other than that, everything in the SDK is standard and un-modified.