Once the application is created, all the Tools, Documentation, Launches etc. get populated in the Quick Panel. They will disappear if none of the files of the application are in selection. If you select the application or any file in the application again, they will reappear. Apart from this if you are seeing this issue, please clarify the following questions:
- When do you see them disappear?
- Is it random or can you recreate it consistently?
Please let us know the detailed steps to reproduce this issue if this is not random.
I don't have steps to recreate it right now, I can update this post when I do.