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☆You can do setup as follows on [Run] -> [External Tools] -> [External Tools Configurations].
Location: C:\Program Files (x86)\Cypress\EZ-USB FX3 SDK\1.3\JTAG\OpenOCD\Windows\openocd.exe
Working Directory: C:\Program Files (x86)\Cypress\EZ-USB FX3 SDK\1.3\JTAG\OpenOCD
Arguments: -f Config\arm926ejs_fx3.cfg
This setting is a bit diffrent to the description on "CYUSB3KIT-003 SuperSpeed Explorer Kit User Guide, Doc. # 001-93186" because directory hierarchy on SDK1.3.4 environment is a bit different compare to "C:\Program Files (x86)\Cypress\SuperSpeed Explorer Kit\1.0\USBSerialOpenOCD".
☆If you would like to setup on "Run Configurations", how about following settings on Arguments?
To change "Program arguments" and "Working directory", you would be able to see correctly invoked messages on the Console.