The microUSB connection on that kit goes to the PSoC5LP, which isn't programmed out of the box. You will need to use PSoC Creator to place and configure a USB component and write supporting code for the PSoC to enumerate with a PC properly.
Here's a code example of using a PSoC5LP as a USB HID Mouse:
The onboard micro-USB connector provides access to the USB block of the PSoC 5LP device. This connector enables you to develop USB applications. It is not connected to Kitprog to program the device.