I'm intrested in this too. I think you might have to set the coherency register 1st. Unfortunatley, all of the code examples for this are down right now.
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I gave it a try with this code, and it seemed to work pretty well.
for(i = 0; i < IN_LEN; i++)
output = Filter_Read16(Filter_CHANNEL_A);
//Take the filter's output and print to terminal via USB
sprintf(buffer, "%d,", output);