I wanted to post this for others that might be looking for help.
Upon searching I found this post about inspecting the contents of EEPROM:
It recomends looking into cydevice.h and finding #define CYDEV_EE_BASE 0x40008000 as the starting location of EEPROM.
I found what looks to be that same infromation for flash:
#define CYDEV_FLS_BASE 0x00100000u
#define CYDEV_FLS_SIZE 0x00010000u
From these parameters I was able to locate the data that was being written to flash.
Is this correct? Are there other ways to do this?
Yes, that is the correct method currently.