I have found the issue.
In the database init, the program was calling the blebat_init function in ROM. I had to tweak it a bit and reconfigure some pins and now it seems to be working okay.
Thanks! Can you share with us some of the tweaks you made to get this working?
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It's pretty adhoc but...
I had to disable to the monitoring blebat functions (blebat_startMonitoring() and blebat_pollMonitor()) so that the program wouldnt go into powersave. Afterwards, I had to initialize my digital input pins using the gpio_configurePin function.
Seems to work okay now.