You are not telling us which PSoC4 you are using, they differ a bit in clock settings. Again: can you please post your complete project, so that we all can have a look at all of your settings. To do so, use
Creator->File->Create Workspace Bundle (minimal)
and attach the resulting file.
I'm trying to post my projects, but keep getting some guff about AJAX error.
It's a CY8C4247LQI-BL483
Did you ever solve this problem? I'm having the same issue using CY8C4248LQI-BL583. I would love to get an answer without posting my design.