cypress bootloader wait for command time-out

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Anonymous
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I need to use the uart bootloader and found the cypress bootloader and example from: AN68272.  The bootloader works well, but I cannot seem to get the "wait for command" time-out feature to work.  No matter the value of "wait for command" time-out  value set the bootloader never does return to the application code if a time-out has occurred.  As far as I can tell the is supposed to operate this way,  As is shown on page 5 of doc 45346. 
http://www.cypress.com/file/45346/download 

   

Am I missing something?  Does the "time-out" need to be manually enabled using an API?  I attached a project built for the pioneer 42 board.  

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