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Question: Is it possible to exchange the byte ordering on the FD lines of FX2 to match that of FX?
In FX2 the first byte in the endpoint always goes out FD[7:0] and the second byte always goes out FD[15:8]. You must take care to wire the data lines appropriately to your device to achieve the necessary ordering:
FD[7:0] -> second byte port on device FD[15:8] -> first byte port on device